HL_4U26_157

3D structure

PDB id

4U26 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

4U26|1|DA|A|781, 4U26|1|DA|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U26_157 not in the Motif Atlas

Geometric match to HL_6JQ6_004

Geometric discrepancy: 0.3227

The information below is about HL_6JQ6_004

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

4U26|1|DA|U|779
4U26|1|DA|G|780
4U26|1|DA|A|781
4U26|1|DA|A|782
4U26|1|DA|A|783
4U26|1|DA|G|784
4U26|1|DA|G|785

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DC

50S ribosomal protein L2