HL_4U27_042

3D structure

PDB id

4U27 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin and linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GAUAC

Length

5 nucleotides

Bulged bases

4U27|1|BA|U|321, 4U27|1|BA|A|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U27_042 not in the Motif Atlas

Homologous match to HL_7RQB_011

Geometric discrepancy: 0.0727

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

4U27|1|BA|G|319
4U27|1|BA|A|320
4U27|1|BA|U|321
4U27|1|BA|A|322
4U27|1|BA|C|323

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BE

50S ribosomal protein L4