HL_4U27_169

3D structure

PDB id

4U27 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin and linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGUUAAUAUUCC

Length

12 nucleotides

Bulged bases

4U27|1|DA|A|1392, 4U27|1|DA|U|1396, 4U27|1|DA|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U27|1|DA|G|1388
4U27|1|DA|G|1389
4U27|1|DA|U|1390
4U27|1|DA|U|1391
4U27|1|DA|A|1392
4U27|1|DA|A|1393
4U27|1|DA|U|1394
4U27|1|DA|A|1395
4U27|1|DA|U|1396
4U27|1|DA|U|1397
4U27|1|DA|C|1398
4U27|1|DA|C|1399

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DT

50S ribosomal protein L23