HL_4U3M_103

3D structure

PDB id

4U3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Anisomycin bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUUCAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U3M_103 not in the Motif Atlas

Homologous match to HL_4V88_217

Geometric discrepancy: 0.319

The information below is about HL_4V88_217

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_67216.9

Basepair signature

cWW-cWW-F-tSH

Number of instances in this motif group

9

Unit IDs

4U3M|1|2|U|1396
4U3M|1|2|U|1397
4U3M|1|2|U|1398
4U3M|1|2|C|1399
4U3M|1|2|A|1400
4U3M|1|2|A|1401
4U3M|1|2|G|1402

Current chains

Chain 2

18S rRNA

Nearby chains

Chain C7

40S ribosomal protein S17-A

Chain D8

40S ribosomal protein S28-A