HL_4U3M_166
3D structure
- PDB id
- 4U3M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Anisomycin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAAUUCAUUUUC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4U3M_166 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.3612
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13963.3
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
4U3M|1|5|G|2534
4U3M|1|5|A|2535
4U3M|1|5|A|2536
4U3M|1|5|U|2537
4U3M|1|5|U|2538
4U3M|1|5|C|2539
4U3M|1|5|A|2540
4U3M|1|5|U|2541
4U3M|1|5|U|2542
4U3M|1|5|U|2543
4U3M|1|5|U|2544
4U3M|1|5|C|2545
Current chains
- Chain 5
- 25s rRNA
Nearby chains
- Chain l8
- 60S ribosomal protein L8-A
- Chain o4
- 60S ribosomal protein L34-A
- Chain s1
- 40S ribosomal protein S1-A
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