HL_4U3M_197

3D structure

PDB id

4U3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Anisomycin bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

ACAGGGCCCAUUCGGGUCUUGU

Length

22 nucleotides

Bulged bases

4U3M|1|6|C|495

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U3M_197 not in the Motif Atlas

Homologous match to HL_8P9A_202

Geometric discrepancy: 0.2027

The information below is about HL_8P9A_202

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U3M|1|6|A|483
4U3M|1|6|C|484
4U3M|1|6|A|485
4U3M|1|6|G|486
4U3M|1|6|G|487
4U3M|1|6|G|488
4U3M|1|6|C|489
4U3M|1|6|C|490
4U3M|1|6|C|491
4U3M|1|6|A|492
4U3M|1|6|U|493
4U3M|1|6|U|494
4U3M|1|6|C|495
4U3M|1|6|G|496
4U3M|1|6|G|497
4U3M|1|6|G|498
4U3M|1|6|U|499
4U3M|1|6|C|500
4U3M|1|6|U|501
4U3M|1|6|U|502
4U3M|1|6|G|503
4U3M|1|6|U|504

Current chains

Chain 6

18S rRNA

Nearby chains

Chain e0

40S ribosomal protein S30-A

Chain s9

40S ribosomal protein S9-A