HL_4U4Q_085

3D structure

PDB id

4U4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Homoharringtonine bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGCCCAUUCGGGUCU

Length

16 nucleotides

Bulged bases

4U4Q|1|2|C|495

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U4Q|1|2|G|486
4U4Q|1|2|G|487
4U4Q|1|2|G|488
4U4Q|1|2|C|489
4U4Q|1|2|C|490
4U4Q|1|2|C|491
4U4Q|1|2|A|492
4U4Q|1|2|U|493
4U4Q|1|2|U|494
4U4Q|1|2|C|495
4U4Q|1|2|G|496
4U4Q|1|2|G|497
4U4Q|1|2|G|498
4U4Q|1|2|U|499
4U4Q|1|2|C|500
4U4Q|1|2|U|501

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain S9

40S ribosomal protein S9-A