HL_4U4Y_165

3D structure

PDB id

4U4Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Pactamycin bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

AAUUCAUUUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U4Y|1|5|A|2535
4U4Y|1|5|A|2536
4U4Y|1|5|U|2537
4U4Y|1|5|U|2538
4U4Y|1|5|C|2539
4U4Y|1|5|A|2540
4U4Y|1|5|U|2541
4U4Y|1|5|U|2542
4U4Y|1|5|U|2543
4U4Y|1|5|U|2544

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain l8

60S ribosomal protein L8-A

Chain s1

40S ribosomal protein S1-A