HL_4U4Y_219

3D structure

PDB id

4U4Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Pactamycin bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

AAGGGGGCAACUCCAU

Length

16 nucleotides

Bulged bases

4U4Y|1|6|C|1700

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U4Y|1|6|A|1693
4U4Y|1|6|A|1694
4U4Y|1|6|G|1695
4U4Y|1|6|G|1696
4U4Y|1|6|G|1697
4U4Y|1|6|G|1698
4U4Y|1|6|G|1699
4U4Y|1|6|C|1700
4U4Y|1|6|A|1701
4U4Y|1|6|A|1702
4U4Y|1|6|C|1703
4U4Y|1|6|U|1704
4U4Y|1|6|C|1705
4U4Y|1|6|C|1706
4U4Y|1|6|A|1707
4U4Y|1|6|U|1708

Current chains

Chain 6

18S ribosomal RNA

Nearby chains

Chain s6

40S ribosomal protein S6-A