HL_4U4Z_088

3D structure

PDB id

4U4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Phyllanthoside bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCUAACCUUGAGUCCUUGUGGCUCUUGGCGAAC

Length

33 nucleotides

Bulged bases

4U4Z|1|2|U|719, 4U4Z|1|2|U|721

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U4Z|1|2|G|703
4U4Z|1|2|C|704
4U4Z|1|2|U|705
4U4Z|1|2|A|706
4U4Z|1|2|A|707
4U4Z|1|2|C|708
4U4Z|1|2|C|709
4U4Z|1|2|U|710
4U4Z|1|2|U|711
4U4Z|1|2|G|712
4U4Z|1|2|A|713
4U4Z|1|2|G|714
4U4Z|1|2|U|715
4U4Z|1|2|C|716
4U4Z|1|2|C|717
4U4Z|1|2|U|718
4U4Z|1|2|U|719
4U4Z|1|2|G|720
4U4Z|1|2|U|721
4U4Z|1|2|G|722
4U4Z|1|2|G|723
4U4Z|1|2|C|724
4U4Z|1|2|U|725
4U4Z|1|2|C|726
4U4Z|1|2|U|727
4U4Z|1|2|U|728
4U4Z|1|2|G|729
4U4Z|1|2|G|730
4U4Z|1|2|C|731
4U4Z|1|2|G|732
4U4Z|1|2|A|733
4U4Z|1|2|A|734
4U4Z|1|2|C|735

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain S4

40S ribosomal protein S4-A