HL_4U50_231

3D structure

PDB id

4U50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Verrucarin bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CCCUUUGG

Length

8 nucleotides

Bulged bases

4U50|1|2|U|194

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U50|1|2|C|189
4U50|1|2|C|190
4U50|1|2|C|191
4U50|1|2|U|192
4U50|1|2|U|193
4U50|1|2|U|194
4U50|1|2|G|195
4U50|1|2|G|196

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain S8

40S ribosomal protein S8-A