HL_4U51_088

3D structure

PDB id

4U51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Narciclasine bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GCUAACCUUGAGUCCUUGUGGCUCUUGGCGAAC

Length

33 nucleotides

Bulged bases

4U51|1|2|U|718, 4U51|1|2|U|719, 4U51|1|2|U|721

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U51|1|2|G|703
4U51|1|2|C|704
4U51|1|2|U|705
4U51|1|2|A|706
4U51|1|2|A|707
4U51|1|2|C|708
4U51|1|2|C|709
4U51|1|2|U|710
4U51|1|2|U|711
4U51|1|2|G|712
4U51|1|2|A|713
4U51|1|2|G|714
4U51|1|2|U|715
4U51|1|2|C|716
4U51|1|2|C|717
4U51|1|2|U|718
4U51|1|2|U|719
4U51|1|2|G|720
4U51|1|2|U|721
4U51|1|2|G|722
4U51|1|2|G|723
4U51|1|2|C|724
4U51|1|2|U|725
4U51|1|2|C|726
4U51|1|2|U|727
4U51|1|2|U|728
4U51|1|2|G|729
4U51|1|2|G|730
4U51|1|2|C|731
4U51|1|2|G|732
4U51|1|2|A|733
4U51|1|2|A|734
4U51|1|2|C|735

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain S4

40S ribosomal protein S4-A