HL_4U51_182
3D structure
- PDB id
- 4U51 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Narciclasine bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CCUUGUG
- Length
- 7 nucleotides
- Bulged bases
- 4U51|1|5|U|3195, 4U51|1|5|U|3198
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4U51_182 not in the Motif Atlas
- Geometric match to HL_5J7L_200
- Geometric discrepancy: 0.2836
- The information below is about HL_5J7L_200
- Detailed Annotation
- Other HL
- Broad Annotation
- Other HL
- Motif group
- HL_08100.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4U51|1|5|C|3193
4U51|1|5|C|3194
4U51|1|5|U|3195
4U51|1|5|U|3196
4U51|1|5|G|3197
4U51|1|5|U|3198
4U51|1|5|G|3199
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain l9
- 60S ribosomal protein L9-A
- Chain m4
- 60S ribosomal protein L14-A
- Chain m6
- 60S ribosomal protein L16-A
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