HL_4U51_245

3D structure

PDB id

4U51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Narciclasine bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GGCCCAUUCGGGUC

Length

14 nucleotides

Bulged bases

4U51|1|2|U|493, 4U51|1|2|U|494, 4U51|1|2|C|495

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U51|1|2|G|487
4U51|1|2|G|488
4U51|1|2|C|489
4U51|1|2|C|490
4U51|1|2|C|491
4U51|1|2|A|492
4U51|1|2|U|493
4U51|1|2|U|494
4U51|1|2|C|495
4U51|1|2|G|496
4U51|1|2|G|497
4U51|1|2|G|498
4U51|1|2|U|499
4U51|1|2|C|500

Current chains

Chain 2

18S ribosomal RNA

Nearby chains