3D structure

PDB id
4U55 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of Cryptopleurine bound to the yeast 80S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
GUCCGAUUUUUUCGUAC
Length
17 nucleotides
Bulged bases
4U55|1|6|G|660
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4U55|1|6|G|656
4U55|1|6|U|657
4U55|1|6|C|658
4U55|1|6|C|659
4U55|1|6|G|660
4U55|1|6|A|661
4U55|1|6|U|662
4U55|1|6|U|663
4U55|1|6|U|664
4U55|1|6|U|665
4U55|1|6|U|666
4U55|1|6|U|667
4U55|1|6|C|668
4U55|1|6|G|669
4U55|1|6|U|670
4U55|1|6|A|673
4U55|1|6|C|674

Current chains

Chain 6
18S ribosomal RNA

Nearby chains

Chain d1
40S ribosomal protein S21-A
Chain s2
40S ribosomal protein S2
Chain s9
40S ribosomal protein S9-A

Coloring options:

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