HL_4U67_004

3D structure

PDB id

4U67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

CGUAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U67_004 not in the Motif Atlas

Homologous match to HL_7A0S_004

Geometric discrepancy: 0.3575

The information below is about HL_7A0S_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_93535.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4U67|1|X|C|133
4U67|1|X|G|134
4U67|1|X|U|135
4U67|1|X|A|136
4U67|1|X|A|137
4U67|1|X|G|138

Current chains

Chain X

23s RNA

Nearby chains

Chain Q

50S ribosomal protein L23

Chain V

50S ribosomal protein L29