HL_4U67_043

3D structure

PDB id

4U67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

GCUUCGC

Length

7 nucleotides

Bulged bases

4U67|1|X|U|1732, 4U67|1|X|C|1734

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U67_043 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2107

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

4U67|1|X|G|1730
4U67|1|X|C|1731
4U67|1|X|U|1732
4U67|1|X|U|1733
4U67|1|X|C|1734
4U67|1|X|G|1735
4U67|1|X|C|1736

Current chains

Chain X

23s RNA

Nearby chains