HL_4V4G_001
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- UUUGAUCCUGG
- Length
- 11 nucleotides
- Bulged bases
- 4V4G|1|AA|U|13
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4G_001 not in the Motif Atlas
- Homologous match to HL_6CZR_072
- Geometric discrepancy: 0.438
- The information below is about HL_6CZR_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.4
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4V4G|1|AA|U|12
4V4G|1|AA|U|13
4V4G|1|AA|U|14
4V4G|1|AA|G|15
4V4G|1|AA|A|16
4V4G|1|AA|U|17
4V4G|1|AA|C|18
4V4G|1|AA|C|19
4V4G|1|AA|U|20
4V4G|1|AA|G|21
4V4G|1|AA|G|22
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AE
- 30S ribosomal protein S5
- Chain AL
- 30S ribosomal protein S12
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