HL_4V4G_045

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GUUCGUGAAAC

Length

11 nucleotides

Bulged bases

4V4G|1|BB|G|399, 4V4G|1|BB|U|400, 4V4G|1|BB|G|401, 4V4G|1|BB|A|402, 4V4G|1|BB|A|403

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|BB|G|395
4V4G|1|BB|U|396
4V4G|1|BB|U|397
4V4G|1|BB|C|398
4V4G|1|BB|G|399
4V4G|1|BB|U|400
4V4G|1|BB|G|401
4V4G|1|BB|A|402
4V4G|1|BB|A|403
4V4G|1|BB|A|404
4V4G|1|BB|C|405

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain B1

50S ribosomal protein L31

Chain BM

50S ribosomal protein L15