HL_4V4G_078
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4G_078 not in the Motif Atlas
- Geometric match to HL_5ID6_001
- Geometric discrepancy: 0.2589
- The information below is about HL_5ID6_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
4V4G|1|BB|G|1893
4V4G|1|BB|U|1894
4V4G|1|BB|A|1895
4V4G|1|BB|A|1896
4V4G|1|BB|C|1897
4V4G|1|BB|U|1898
4V4G|1|BB|A|1899
4V4G|1|BB|U|1900
4V4G|1|BB|A|1901
4V4G|1|BB|A|1902
4V4G|1|BB|C|1903
Current chains
- Chain BB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain Aa
- protein Y
Coloring options: