HL_4V4G_159

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GGCUUAGAAGCAGCC

Length

15 nucleotides

Bulged bases

4V4G|1|DB|U|1077, 4V4G|1|DB|A|1081, 4V4G|1|DB|A|1084

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|DB|G|1073
4V4G|1|DB|G|1074
4V4G|1|DB|C|1075
4V4G|1|DB|U|1076
4V4G|1|DB|U|1077
4V4G|1|DB|A|1078
4V4G|1|DB|G|1079
4V4G|1|DB|A|1080
4V4G|1|DB|A|1081
4V4G|1|DB|G|1082
4V4G|1|DB|C|1083
4V4G|1|DB|A|1084
4V4G|1|DB|G|1085
4V4G|1|DB|C|1086
4V4G|1|DB|C|1087

Current chains

Chain DB

23S RIBOSOMAL RNA

Nearby chains

Chain DJ

50S ribosomal protein L11

Chain DN

50S ribosomal protein L16

Chain DW

general stress protein Ctc