HL_4V4G_175

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GUAAGUGCAAGCAAAGC

Length

17 nucleotides

Bulged bases

4V4G|1|DB|A|3866, 4V4G|1|DB|A|3876, 4V4G|1|DB|G|1861

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|DB|G|1855
4V4G|1|DB|U|1856
4V4G|1|DB|A|3865
4V4G|1|DB|A|3866
4V4G|1|DB|G|3867
4V4G|1|DB|U|3868
4V4G|1|DB|G|3869
4V4G|1|DB|C|3870
4V4G|1|DB|A|3871
4V4G|1|DB|A|3872
4V4G|1|DB|G|3873
4V4G|1|DB|C|3874
4V4G|1|DB|A|3875
4V4G|1|DB|A|3876
4V4G|1|DB|A|3877
4V4G|1|DB|G|1861
4V4G|1|DB|C|1862

Current chains

Chain DB

23S RIBOSOMAL RNA

Nearby chains

Chain D7

50S ribosomal protein L1P