HL_4V4G_227

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

CGGGUAACCUACGGGAAGAG

Length

20 nucleotides

Bulged bases

4V4G|1|EA|G|1443, 4V4G|1|EA|U|1450, 4V4G|1|EA|A|1451, 4V4G|1|EA|C|1452, 4V4G|1|EA|A|1456, 4V4G|1|EA|A|1460

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|EA|C|1440
4V4G|1|EA|G|1441
4V4G|1|EA|G|1442
4V4G|1|EA|G|1443
4V4G|1|EA|U|1445
4V4G|1|EA|A|1446
4V4G|1|EA|A|1447
4V4G|1|EA|C|1448
4V4G|1|EA|C|1449
4V4G|1|EA|U|1450
4V4G|1|EA|A|1451
4V4G|1|EA|C|1452
4V4G|1|EA|G|1453
4V4G|1|EA|G|1454
4V4G|1|EA|G|1455
4V4G|1|EA|A|1456
4V4G|1|EA|A|1457
4V4G|1|EA|G|1458
4V4G|1|EA|A|1460
4V4G|1|EA|G|1461

Current chains

Chain EA

16S ribosomal RNA

Nearby chains

Chain ET

30S ribosomal protein S20

Chain FB

Large subunit ribosomal RNA; LSU rRNA

Chain FQ

50S ribosomal protein L19