HL_4V4G_264

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

CAAGCUAUGGCUAUGCUG

Length

18 nucleotides

Bulged bases

4V4G|1|FB|A|1463, 4V4G|1|FB|A|1468, 4V4G|1|FB|U|1469, 4V4G|1|FB|A|1474, 4V4G|1|FB|U|1475

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|FB|C|1462
4V4G|1|FB|A|1463
4V4G|1|FB|A|1464
4V4G|1|FB|G|1465
4V4G|1|FB|C|1466
4V4G|1|FB|U|1467
4V4G|1|FB|A|1468
4V4G|1|FB|U|1469
4V4G|1|FB|G|1470
4V4G|1|FB|G|1471
4V4G|1|FB|C|1472
4V4G|1|FB|U|1473
4V4G|1|FB|A|1474
4V4G|1|FB|U|1475
4V4G|1|FB|G|1476
4V4G|1|FB|C|1477
4V4G|1|FB|U|1478
4V4G|1|FB|G|1479

Current chains

Chain FB

23S RIBOSOMAL RNA

Nearby chains

Chain FO

50S ribosomal protein L17