3D structure

PDB id
4V4G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
Experimental method
X-RAY DIFFRACTION
Resolution
11.5 Å

Loop

Sequence
GGGUCAGAAAAUCUACC
Length
17 nucleotides
Bulged bases
4V4G|1|FB|G|1504, 4V4G|1|FB|U|1505, 4V4G|1|FB|C|1506, 4V4G|1|FB|A|1507, 4V4G|1|FB|A|1509, 4V4G|1|FB|U|1513
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V4G|1|FB|G|1502
4V4G|1|FB|G|1503
4V4G|1|FB|G|1504
4V4G|1|FB|U|1505
4V4G|1|FB|C|1506
4V4G|1|FB|A|1507
4V4G|1|FB|G|1508
4V4G|1|FB|A|1509
4V4G|1|FB|A|1510
4V4G|1|FB|A|1511
4V4G|1|FB|A|1512
4V4G|1|FB|U|1513
4V4G|1|FB|C|1514
4V4G|1|FB|U|1515
4V4G|1|FB|A|1516
4V4G|1|FB|C|1517
4V4G|1|FB|C|1518

Current chains

Chain FB
23S RIBOSOMAL RNA

Nearby chains

Chain FD
50S ribosomal protein L2

Coloring options:

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