3D structure

PDB id
4V4G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
Experimental method
X-RAY DIFFRACTION
Resolution
11.5 Å

Loop

Sequence
GGCGGCUCAACCGCU
Length
15 nucleotides
Bulged bases
4V4G|1|GA|C|841, 4V4G|1|GA|U|842, 4V4G|1|GA|C|843, 4V4G|1|GA|A|844, 4V4G|1|GA|A|845
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V4G|1|GA|G|836
4V4G|1|GA|G|837
4V4G|1|GA|C|838
4V4G|1|GA|G|839
4V4G|1|GA|G|840
4V4G|1|GA|C|841
4V4G|1|GA|U|842
4V4G|1|GA|C|843
4V4G|1|GA|A|844
4V4G|1|GA|A|845
4V4G|1|GA|C|846
4V4G|1|GA|C|847
4V4G|1|GA|G|848
4V4G|1|GA|C|849
4V4G|1|GA|U|850

Current chains

Chain GA
16S ribosomal RNA

Nearby chains

Chain GB
30S ribosomal protein S2
Chain GF
30S ribosomal protein S6
Chain GR
30S ribosomal protein S18

Coloring options:

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