HL_4V4G_339

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GGACCACC

Length

8 nucleotides

Bulged bases

4V4G|1|HB|G|424

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4G_339 not in the Motif Atlas

Homologous match to HL_9DFE_013

Geometric discrepancy: 0.4142

The information below is about HL_9DFE_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

4V4G|1|HB|G|423
4V4G|1|HB|G|424
4V4G|1|HB|A|425
4V4G|1|HB|C|426
4V4G|1|HB|C|427
4V4G|1|HB|A|428
4V4G|1|HB|C|429
4V4G|1|HB|C|430

Current chains

Chain HB

23S RIBOSOMAL RNA

Nearby chains

Chain H7

50S ribosomal protein L1P