HL_4V4G_343

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

CCUAUUGAAGCAUG

Length

14 nucleotides

Bulged bases

4V4G|1|HB|A|576, 4V4G|1|HB|U|577, 4V4G|1|HB|C|583

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|HB|C|573
4V4G|1|HB|C|574
4V4G|1|HB|U|575
4V4G|1|HB|A|576
4V4G|1|HB|U|577
4V4G|1|HB|U|578
4V4G|1|HB|G|579
4V4G|1|HB|A|580
4V4G|1|HB|A|581
4V4G|1|HB|G|582
4V4G|1|HB|C|583
4V4G|1|HB|A|584
4V4G|1|HB|U|585
4V4G|1|HB|G|586

Current chains

Chain HB

23S RIBOSOMAL RNA

Nearby chains

Chain HE

50S ribosomal protein L3

Chain HF

50S ribosomal protein L4

Chain HM

50S ribosomal protein L15

Chain HR

50S ribosomal protein L20

Chain HS

50S ribosomal protein L21