HL_4V4G_373
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- GUAAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 4V4G|1|HB|A|2013, 4V4G|1|HB|A|2014, 4V4G|1|HB|G|2015, 4V4G|1|HB|U|2017, 4V4G|1|HB|G|2018
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4G_373 not in the Motif Atlas
- Homologous match to HL_7A0S_049
- Geometric discrepancy: 0.5504
- The information below is about HL_7A0S_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_61996.3
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4V4G|1|HB|G|2010
4V4G|1|HB|U|2011
4V4G|1|HB|A|2012
4V4G|1|HB|A|2013
4V4G|1|HB|A|2014
4V4G|1|HB|G|2015
4V4G|1|HB|A|2016
4V4G|1|HB|U|2017
4V4G|1|HB|G|2018
4V4G|1|HB|C|2019
Current chains
- Chain HB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain HE
- 50S ribosomal protein L3
- Chain HK
- 50S ribosomal protein L13
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