HL_4V4G_378
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- CGCAAAGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4G_378 not in the Motif Atlas
- Homologous match to HL_9DFE_054
- Geometric discrepancy: 0.3613
- The information below is about HL_9DFE_054
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 24
Unit IDs
4V4G|1|HB|C|2303
4V4G|1|HB|G|2304
4V4G|1|HB|C|2305
4V4G|1|HB|A|2306
4V4G|1|HB|A|2307
4V4G|1|HB|A|2308
4V4G|1|HB|G|2309
4V4G|1|HB|G|2310
Current chains
- Chain HB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain HG
- 50S ribosomal protein L5
- Chain HX
- 50S ribosomal protein L27
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