HL_4V4G_397

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GUGGGGUAAUGGCCCAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|IA|G|255
4V4G|1|IA|U|256
4V4G|1|IA|G|257
4V4G|1|IA|G|258
4V4G|1|IA|G|259
4V4G|1|IA|G|260
4V4G|1|IA|U|261
4V4G|1|IA|A|262
4V4G|1|IA|A|263
4V4G|1|IA|U|264
4V4G|1|IA|G|265
4V4G|1|IA|G|266
4V4G|1|IA|C|267
4V4G|1|IA|C|268
4V4G|1|IA|C|269
4V4G|1|IA|A|270
4V4G|1|IA|C|271

Current chains

Chain IA

16S ribosomal RNA

Nearby chains

Chain IQ

30S ribosomal protein S17

Chain IT

30S ribosomal protein S20

Chain JB

Large subunit ribosomal RNA; LSU rRNA