HL_4V4G_612

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

AGGUCAAGAUUCCU

Length

14 nucleotides

Bulged bases

4V4G|1|JB|U|1409, 4V4G|1|JB|U|1410

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|JB|A|1400
4V4G|1|JB|G|1401
4V4G|1|JB|G|1402
4V4G|1|JB|U|1403
4V4G|1|JB|C|1404
4V4G|1|JB|A|1405
4V4G|1|JB|A|1406
4V4G|1|JB|G|1407
4V4G|1|JB|A|1408
4V4G|1|JB|U|1409
4V4G|1|JB|U|1410
4V4G|1|JB|C|1411
4V4G|1|JB|C|1412
4V4G|1|JB|U|1413

Current chains

Chain JB

23S RIBOSOMAL RNA

Nearby chains

Chain JU

50S ribosomal protein L23