HL_4V4G_619

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

CGCUGAAAGCAUCUAAGCG

Length

19 nucleotides

Bulged bases

4V4G|1|JB|G|2731, 4V4G|1|JB|C|2735, 4V4G|1|JB|A|2737, 4V4G|1|JB|A|2738

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|JB|C|2723
4V4G|1|JB|G|2724
4V4G|1|JB|C|2725
4V4G|1|JB|U|2726
4V4G|1|JB|G|2727
4V4G|1|JB|A|2728
4V4G|1|JB|A|2729
4V4G|1|JB|A|2730
4V4G|1|JB|G|2731
4V4G|1|JB|C|2732
4V4G|1|JB|A|2733
4V4G|1|JB|U|2734
4V4G|1|JB|C|2735
4V4G|1|JB|U|2736
4V4G|1|JB|A|2737
4V4G|1|JB|A|2738
4V4G|1|JB|G|2739
4V4G|1|JB|C|2740
4V4G|1|JB|G|2741

Current chains

Chain JB

23S RIBOSOMAL RNA

Nearby chains

Chain J6

50S ribosomal protein L36

Chain JH

50S ribosomal protein L6

Chain JK

50S ribosomal protein L13