HL_4V4H_210

3D structure

PDB id

4V4H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

GUCGGACAU

Length

9 nucleotides

Bulged bases

4V4H|1|BB|G|2307, 4V4H|1|BB|G|2308, 4V4H|1|BB|A|2311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4H|1|BB|G|2304
4V4H|1|BB|U|2305
4V4H|1|BB|C|2306
4V4H|1|BB|G|2307
4V4H|1|BB|G|2308
4V4H|1|BB|A|2309
4V4H|1|BB|C|2310
4V4H|1|BB|A|2311
4V4H|1|BB|U|2312

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain BF

50S RIBOSOMAL PROTEIN L5