HL_4V4Q_070

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

GGCGACGGUUGUCC

Length

14 nucleotides

Bulged bases

4V4Q|1|BB|A|1453, 4V4Q|1|BB|C|1454, 4V4Q|1|BB|U|1458, 4V4Q|1|BB|G|1459, 4V4Q|1|BB|U|1460

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4Q|1|BB|G|1449
4V4Q|1|BB|G|1450
4V4Q|1|BB|C|1451
4V4Q|1|BB|G|1452
4V4Q|1|BB|A|1453
4V4Q|1|BB|C|1454
4V4Q|1|BB|G|1455
4V4Q|1|BB|G|1456
4V4Q|1|BB|U|1457
4V4Q|1|BB|U|1458
4V4Q|1|BB|G|1459
4V4Q|1|BB|U|1460
4V4Q|1|BB|C|1461
4V4Q|1|BB|C|1462

Current chains

Chain BB

23S ribosomal RNA

Nearby chains

Chain BN

50S ribosomal protein L17