HL_4V4Q_109

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

GGUAACGGC

Length

9 nucleotides

Bulged bases

4V4Q|1|CA|G|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72935.1

Basepair signature

cWW-tSH-R-R-R-R

Number of instances in this motif group

42

Unit IDs

4V4Q|1|CA|G|259
4V4Q|1|CA|G|260
4V4Q|1|CA|U|261
4V4Q|1|CA|A|262
4V4Q|1|CA|A|263
4V4Q|1|CA|C|264
4V4Q|1|CA|G|265
4V4Q|1|CA|G|266
4V4Q|1|CA|C|267

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CQ

30S ribosomal protein S17

Chain CT

30S ribosomal protein S20