HL_4V4Q_110

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

UGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30528.1

Basepair signature

cWW-tSH-R-R

Number of instances in this motif group

400

Unit IDs

4V4Q|1|CA|U|296
4V4Q|1|CA|G|297
4V4Q|1|CA|A|298
4V4Q|1|CA|G|299
4V4Q|1|CA|A|300
4V4Q|1|CA|G|301

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CD

30S ribosomal protein S4

Chain CE

30S ribosomal protein S5

Chain CL

30S ribosomal protein S12

Chain CQ

30S ribosomal protein S17