HL_4V4R_044

3D structure

PDB id

4V4R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the whole ribosomal complex.

Experimental method

X-RAY DIFFRACTION

Resolution

5.9 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4R_044 not in the Motif Atlas

Homologous match to HL_4WF9_008

Geometric discrepancy: 0.2838

The information below is about HL_4WF9_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76371.1

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

13

Unit IDs

4V4R|1|BA|C|246
4V4R|1|BA|G|247
4V4R|1|BA|G|248
4V4R|1|BA|C|249
4V4R|1|BA|G|250
4V4R|1|BA|A|251
4V4R|1|BA|G|252

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AW

Transfer RNA; tRNA

Chain B4

50S ribosomal protein L31

Chain B8

50S ribosomal protein L35

Chain BP

50S ribosomal protein L15