HL_4V4T_098

3D structure

PDB id

4V4T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the whole ribosomal complex with a stop codon in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

6.46 Å

Loop

Sequence

CCUAGUACGAGAGGACCGG

Length

19 nucleotides

Bulged bases

4V4T|1|BA|G|2655

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4T|1|BA|C|2651
4V4T|1|BA|C|2652
4V4T|1|BA|U|2653
4V4T|1|BA|A|2654
4V4T|1|BA|G|2655
4V4T|1|BA|U|2656
4V4T|1|BA|A|2657
4V4T|1|BA|C|2658
4V4T|1|BA|G|2659
4V4T|1|BA|A|2660
4V4T|1|BA|G|2661
4V4T|1|BA|A|2662
4V4T|1|BA|G|2663
4V4T|1|BA|G|2664
4V4T|1|BA|A|2665
4V4T|1|BA|C|2666
4V4T|1|BA|C|2667
4V4T|1|BA|G|2668
4V4T|1|BA|G|2669

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BH

50S ribosomal protein L6

Chain BO

50S ribosomal protein L14