HL_4V4X_044

3D structure

PDB id

4V4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.

Experimental method

X-RAY DIFFRACTION

Resolution

5 Å

Loop

Sequence

GGAACUGAAACAUCUCAGUAC

Length

21 nucleotides

Bulged bases

4V4X|1|BA|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4X|1|BA|G|188
4V4X|1|BA|G|189
4V4X|1|BA|A|190
4V4X|1|BA|A|191
4V4X|1|BA|C|192
4V4X|1|BA|U|193
4V4X|1|BA|G|194
4V4X|1|BA|A|195
4V4X|1|BA|A|196
4V4X|1|BA|A|197
4V4X|1|BA|C|198
4V4X|1|BA|A|199
4V4X|1|BA|U|200
4V4X|1|BA|C|201
4V4X|1|BA|U|202
4V4X|1|BA|C|203
4V4X|1|BA|A|204
4V4X|1|BA|G|205
4V4X|1|BA|U|206
4V4X|1|BA|A|207
4V4X|1|BA|C|208

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AD

Transfer RNA; tRNA

Chain B3

50S ribosomal protein L31

Chain BO

50S ribosomal protein L15