HL_4V4X_101

3D structure

PDB id

4V4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.

Experimental method

X-RAY DIFFRACTION

Resolution

5 Å

Loop

Sequence

CUAGUACGAGAGGACCG

Length

17 nucleotides

Bulged bases

4V4X|1|BA|G|2655

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4X|1|BA|C|2652
4V4X|1|BA|U|2653
4V4X|1|BA|A|2654
4V4X|1|BA|G|2655
4V4X|1|BA|U|2656
4V4X|1|BA|A|2657
4V4X|1|BA|C|2658
4V4X|1|BA|G|2659
4V4X|1|BA|A|2660
4V4X|1|BA|G|2661
4V4X|1|BA|A|2662
4V4X|1|BA|G|2663
4V4X|1|BA|G|2664
4V4X|1|BA|A|2665
4V4X|1|BA|C|2666
4V4X|1|BA|C|2667
4V4X|1|BA|G|2668

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BH

50S ribosomal protein L6