3D structure

PDB id
4V4X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.
Experimental method
X-RAY DIFFRACTION
Resolution
5 Å

Loop

Sequence
UGAAAGCAUCUAA
Length
13 nucleotides
Bulged bases
4V4X|1|BA|G|2751, 4V4X|1|BA|C|2755
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V4X|1|BA|U|2746
4V4X|1|BA|G|2747
4V4X|1|BA|A|2748
4V4X|1|BA|A|2749
4V4X|1|BA|A|2750
4V4X|1|BA|G|2751
4V4X|1|BA|C|2752
4V4X|1|BA|A|2753
4V4X|1|BA|U|2754
4V4X|1|BA|C|2755
4V4X|1|BA|U|2756
4V4X|1|BA|A|2757
4V4X|1|BA|A|2758

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B8
50S ribosomal protein L36
Chain BH
50S ribosomal protein L6
Chain BM
50S ribosomal protein L13

Coloring options:

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