HL_4V4X_117

3D structure

PDB id

4V4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.

Experimental method

X-RAY DIFFRACTION

Resolution

5 Å

Loop

Sequence

UUAAGCCGUUGAGGCGGAG

Length

19 nucleotides

Bulged bases

4V4X|1|BA|U|613, 4V4X|1|BA|U|614, 4V4X|1|BA|A|621

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4X|1|BA|U|606
4V4X|1|BA|U|607
4V4X|1|BA|A|608
4V4X|1|BA|A|609
4V4X|1|BA|G|609|||A
4V4X|1|BA|C|610
4V4X|1|BA|C|611
4V4X|1|BA|G|612
4V4X|1|BA|U|613
4V4X|1|BA|U|614
4V4X|1|BA|G|615
4V4X|1|BA|A|616
4V4X|1|BA|G|617
4V4X|1|BA|G|618
4V4X|1|BA|C|618|||A
4V4X|1|BA|G|619
4V4X|1|BA|G|620
4V4X|1|BA|A|621
4V4X|1|BA|G|622

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BF

50S ribosomal protein L4

Chain BO

50S ribosomal protein L15