HL_4V4Y_058
3D structure
- PDB id
- 4V4Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 5.5 Å
Loop
- Sequence
- CCUAUUGAAGCAUG
- Length
- 14 nucleotides
- Bulged bases
- 4V4Y|1|BA|C|574
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V4Y|1|BA|C|564
4V4Y|1|BA|C|565
4V4Y|1|BA|U|566
4V4Y|1|BA|A|567
4V4Y|1|BA|U|568
4V4Y|1|BA|U|569
4V4Y|1|BA|G|570
4V4Y|1|BA|A|571
4V4Y|1|BA|A|572
4V4Y|1|BA|G|573
4V4Y|1|BA|C|574
4V4Y|1|BA|A|575
4V4Y|1|BA|U|576
4V4Y|1|BA|G|577
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B4
- 50S ribosomal protein L32
- Chain BE
- 50S ribosomal protein L3
- Chain BF
- 50S ribosomal protein L4
- Chain BO
- 50S ribosomal protein L15
- Chain BT
- 50S ribosomal protein L20
- Chain BU
- 50S ribosomal protein L21
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