HL_4V4Z_033

3D structure

PDB id

4V4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.

Experimental method

X-RAY DIFFRACTION

Resolution

4.51 Å

Loop

Sequence

CAGCCGGUAG

Length

10 nucleotides

Bulged bases

4V4Z|1|AC|C|16, 4V4Z|1|AC|G|18

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4Z|1|AC|C|13
4V4Z|1|AC|A|14
4V4Z|1|AC|G|15
4V4Z|1|AC|C|16
4V4Z|1|AC|C|17
4V4Z|1|AC|G|18
4V4Z|1|AC|G|19
4V4Z|1|AC|U|20
4V4Z|1|AC|A|21
4V4Z|1|AC|G|22

Current chains

Chain AC

tRNA fMET (unmodified bases)

Nearby chains

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BG

50S RIBOSOMAL PROTEIN L5