HL_4V4Z_049
3D structure
- PDB id
- 4V4Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.51 Å
Loop
- Sequence
- GUGAAAGCC
- Length
- 9 nucleotides
- Bulged bases
- 4V4Z|1|BA|G|329, 4V4Z|1|BA|A|330, 4V4Z|1|BA|A|331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4Z_049 not in the Motif Atlas
- Homologous match to HL_4WF9_012
- Geometric discrepancy: 0.3019
- The information below is about HL_4WF9_012
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.2
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 13
Unit IDs
4V4Z|1|BA|G|327
4V4Z|1|BA|U|328
4V4Z|1|BA|G|329
4V4Z|1|BA|A|330
4V4Z|1|BA|A|331
4V4Z|1|BA|A|332
4V4Z|1|BA|G|333
4V4Z|1|BA|C|334
4V4Z|1|BA|C|335
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain BF
- 50S RIBOSOMAL PROTEIN L4
- Chain BX
- 50S RIBOSOMAL PROTEIN L24
Coloring options: