3D structure

PDB id
4V4Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.
Experimental method
X-RAY DIFFRACTION
Resolution
4.51 Å

Loop

Sequence
CCUAUUGAAGCAUG
Length
14 nucleotides
Bulged bases
4V4Z|1|BA|C|574
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V4Z|1|BA|C|564
4V4Z|1|BA|C|565
4V4Z|1|BA|U|566
4V4Z|1|BA|A|567
4V4Z|1|BA|U|568
4V4Z|1|BA|U|569
4V4Z|1|BA|G|570
4V4Z|1|BA|A|571
4V4Z|1|BA|A|572
4V4Z|1|BA|G|573
4V4Z|1|BA|C|574
4V4Z|1|BA|A|575
4V4Z|1|BA|U|576
4V4Z|1|BA|G|577

Current chains

Chain BA
23S rRNA

Nearby chains

Chain B4
50S RIBOSOMAL PROTEIN L32
Chain BE
50S RIBOSOMAL PROTEIN L3
Chain BF
50S RIBOSOMAL PROTEIN L4
Chain BO
50S RIBOSOMAL PROTEIN L15
Chain BT
50S RIBOSOMAL PROTEIN L20
Chain BU
50S RIBOSOMAL PROTEIN L21

Coloring options:

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