HL_4V51_234

3D structure

PDB id

4V51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UGGGCGCAAGCCUGA

Length

15 nucleotides

Bulged bases

4V51|1|CA|G|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V51|1|CA|U|375
4V51|1|CA|G|376
4V51|1|CA|G|377
4V51|1|CA|G|378
4V51|1|CA|C|379
4V51|1|CA|G|380
4V51|1|CA|C|381
4V51|1|CA|A|382
4V51|1|CA|A|383
4V51|1|CA|G|384
4V51|1|CA|C|385
4V51|1|CA|C|386
4V51|1|CA|U|387
4V51|1|CA|G|388
4V51|1|CA|A|389

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CP

30S RIBOSOMAL PROTEIN S16