HL_4V51_237

3D structure

PDB id

4V51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GUUGCCAGCGGUUCGGCCGGGCACUC

Length

26 nucleotides

Bulged bases

4V51|1|CA|U|1125, 4V51|1|CA|U|1136, 4V51|1|CA|C|1137

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V51|1|CA|G|1124
4V51|1|CA|U|1125
4V51|1|CA|U|1126
4V51|1|CA|G|1127
4V51|1|CA|C|1128
4V51|1|CA|C|1129
4V51|1|CA|A|1130
4V51|1|CA|G|1131
4V51|1|CA|C|1132
4V51|1|CA|G|1133
4V51|1|CA|G|1134
4V51|1|CA|U|1135
4V51|1|CA|U|1136
4V51|1|CA|C|1137
4V51|1|CA|G|1138
4V51|1|CA|G|1139
4V51|1|CA|C|1140
4V51|1|CA|C|1141
4V51|1|CA|G|1142
4V51|1|CA|G|1143
4V51|1|CA|G|1144
4V51|1|CA|C|1145
4V51|1|CA|A|1146
4V51|1|CA|C|1147
4V51|1|CA|U|1148
4V51|1|CA|C|1149

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CI

30S RIBOSOMAL PROTEIN S9

Chain CJ

30S RIBOSOMAL PROTEIN S10