HL_4V54_164
3D structure
- PDB id
- 4V54 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GAAACAAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V54_164 not in the Motif Atlas
- Homologous match to HL_7A0S_027
- Geometric discrepancy: 0.238
- The information below is about HL_7A0S_027
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47171.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
4V54|1|DB|G|978
4V54|1|DB|A|979
4V54|1|DB|A|980
4V54|1|DB|A|981
4V54|1|DB|C|982
4V54|1|DB|A|983
4V54|1|DB|A|984
4V54|1|DB|C|985
Current chains
- Chain DB
- 23S rRNA
Nearby chains
- Chain DQ
- 50S ribosomal protein L20
- Chain DR
- 50S ribosomal protein L21
- Chain DY
- 50S ribosomal protein L30
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